PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK26767.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 423aa    MW: 47134.5 Da    PI: 6.8916
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK26767.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix63.35.7e-2034123186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +Wt++e+ aL++a+++++ +lrrg+l++++W++v+ ++    + +g  +s++qC++k+e+l+kry+ +k+++ +r  + ss++ +f  l+
  KFK26767.1  34 CWTDEETAALVNAYKDKWFSLRRGNLRAADWDDVALAVssssSIGGPPKSAIQCRHKIEKLRKRYRGEKQRALNRPGKFSSSWDLFPILD 123
                 8**********************************999888777888****************************9999*******9876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.3E-2033125No hitNo description
SMARTSM005950.002942130IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MSIADDGSPI AMAIDPSSAV TVATTTTRRV PPPCWTDEET AALVNAYKDK WFSLRRGNLR  60
AADWDDVALA VSSSSSIGGP PKSAIQCRHK IEKLRKRYRG EKQRALNRPG KFSSSWDLFP  120
ILDAMEFAPV TPAVVETYDP DLDHDDDGND GFRVRSKRSG KFSGYNESPR EVGDGFGVRS  180
RVKSQNQMKM YGGFDSDHDS GLKRKYNGNN PKVSADFDVE SDDEIVLVPK ATRFKSHGKP  240
SLGEFSHSGG GGFPLKSFGD RSFGSHGFMK PKSFSKPEAN FSPEMDYDDE YDDDQGFQPR  300
VQNSRSGSRS NGFSRKDGMY PPRNSGVSNG YGSSSRFKQE QMNAAEVESD PIDDVVSSVK  360
MLTEMFVRVE NSKMEMMREM EKTRMEMELK HCQMMLESQQ QIIGAFAEAL SEKKSTNARR  420
PLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009145223.10.0PREDICTED: uncharacterized protein LOC103868920
RefseqXP_013733824.10.0PREDICTED: uncharacterized protein LOC106437476
TrEMBLA0A087GA650.0A0A087GA65_ARAAL; Uncharacterized protein
STRINGBra040110.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM104831828
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.17e-27Trihelix family protein